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Architecture Overview

HOW IT ALL CONNECTS // CARBYNE.EXE

System Topology

PhiVector High-Level Architecture
┌─────────────────────────────────────────────────────────────────────────────┐
│                              HUMAN LAYER                                    │
│                                                                             │
│                              ┌─────────┐                                    │
│                              │  STRYK  │                                    │
│                              └────┬────┘                                    │
│                                   │                                         │
└───────────────────────────────────┼─────────────────────────────────────────┘
                                    │
┌───────────────────────────────────┼─────────────────────────────────────────┐
│                              AGENT LAYER                                    │
│                                   │                                         │
│         ┌─────────────────────────┼─────────────────────────┐               │
│         │                         │                         │               │
│         ▼                         ▼                         ▼               │
│   ┌───────────┐           ┌───────────────┐           ┌───────────┐         │
│   │    DC     │◄─────────►│   P15 BRIDGE  │◄─────────►│   KALIC   │         │
│   │ (Desktop) │ WM_COPYDATA│  Agent Bridge │WM_COPYDATA│  (WSL2)   │         │
│   └─────┬─────┘           └───────────────┘           └─────┬─────┘         │
│         │                                                   │               │
└─────────┼───────────────────────────────────────────────────┼───────────────┘
          │                                                   │
┌─────────┼───────────────────────────────────────────────────┼───────────────┐
│         │              KNOWLEDGE LAYER                      │               │
│         ▼                                                   ▼               │
│   ┌───────────┐                                       ┌───────────┐         │
│   │  PhiSHRI  │                                       │kalic_brain│         │
│   │ 600+ doors│                                       │ 5 regions │         │
│   └─────┬─────┘                                       └─────┬─────┘         │
│         │                                                   │               │
│         │  ┌──────────┐  ┌──────────┐  ┌──────────┐        │               │
│         ├─►│ SECURITY │  │  TOOLS   │  │ WORKFLOWS│        │               │
│         │  │  55 doors│  │ 115 doors│  │ 205 doors│        │               │
│         │  └──────────┘  └──────────┘  └──────────┘        │               │
│         │                                                   │               │
│         │  ┌──────────┐  ┌──────────┐  ┌──────────┐        │               │
│         └─►│   ARCH   │  │  ERRORS  │  │ PROJECTS │        │               │
│            │  50 doors│  │  various │  │  various │        │               │
│            └──────────┘  └──────────┘  └──────────┘        │               │
│                                                             │               │
│                                      ┌──────────────────────┘               │
│                                      │                                      │
│            ┌──────────┐  ┌──────────┼┐  ┌──────────┐  ┌──────────┐         │
│            │ FRONTAL  │  │ TEMPORAL ││  │ PARIETAL │  │CEREBELLUM│         │
│            │ decisions│  │ learnings││  │navigation│  │ commands │         │
│            └──────────┘  └──────────┼┘  └──────────┘  └──────────┘         │
│                                      │                                      │
│                              ┌───────┴──┐                                   │
│                              │BRAINSTEM │                                   │
│                              │ DO NOTs  │                                   │
│                              └──────────┘                                   │
└─────────────────────────────────────────────────────────────────────────────┘

┌─────────────────────────────────────────────────────────────────────────────┐
│                              TOOL LAYER                                     │
│                                                                             │
│  ┌─────────────────────────────────────────────────────────────────────┐    │
│  │                     MCP TOOLKIT (119 tools)                         │    │
│  ├───────────┬───────────┬───────────┬───────────┬───────────┬─────────┤    │
│  │ Everything│    Git    │  Windows  │  SigCon6  │Multiplexor│ Screen  │    │
│  │  34 tools │  20 tools │  18 tools │  26 tools │  10 tools │ 7 tools │    │
│  ├───────────┼───────────┼───────────┼───────────┼───────────┼─────────┤    │
│  │file search│  version  │ PowerShell│  network  │ persistent│  window │    │
│  │  <100ms   │  control  │  process  │diagnostics│  terminal │ capture │    │
│  └───────────┴───────────┴───────────┴───────────┴───────────┴─────────┘    │
│                                                                             │
└─────────────────────────────────────────────────────────────────────────────┘

┌─────────────────────────────────────────────────────────────────────────────┐
│                            STORAGE LAYER                                    │
│                                                                             │
│  ┌─────────────────────────────────────────────────────────────────────┐    │
│  │                      1TB VHDX PORTABLE DRIVE                        │    │
│  ├─────────────┬─────────────┬─────────────┬─────────────┬─────────────┤    │
│  │   C:\Tools  │  C:\PhiDEX  │  C:\Dev     │  Configs    │  Runtimes   │    │
│  │   binaries  │   projects  │   source    │   MCP JSON  │   (if any)  │    │
│  └─────────────┴─────────────┴─────────────┴─────────────┴─────────────┘    │
│                                                                             │
└─────────────────────────────────────────────────────────────────────────────┘

Component Details

Agent Layer

Component Location Role
DC Claude Desktop (Windows) Orchestrator, memory management, user interface
KALIC Claude Code (WSL2/Kali) Terminal agent, security operations, CLI tasks
P15 Bridge AutoHotkey + WM_COPYDATA Inter-agent messaging, synchronous communication

Tool Hallway (December 2025)

Extension of PhiSHRI's door-based architecture to MCP tools. Same Matrix hallway concept—different wing.

Knowledge Hallway → Documentation doors (623+)
Tool Hallway     → Executable MCP tool schemas (112 doors)
112
Tool Doors
95%
Context Reduction

Architecture validated by Anthropic (Nov 24, 2025) — Their defer_loading and Tool Search Tool mirrors our implementation.

Anthropic FeaturePhiSHRI Equivalent
defer_loading: trueTool Hallway doors
Tool Search Toolphishri_tool_search
Tool Use Examplesexamples[] per door

Knowledge Layer

System Size Purpose
PhiSHRI 600+ doors Long-term knowledge storage, semantic search, indexed solutions
kalic_brain 5 regions Working memory, decision gates, learnings, navigation
semantic_links.json ~185 tokens Keyword router, surgical reads, enforcement triggers

Tool Layer

128
Total Tools
9
MCP Servers
0
External Dependencies
Server Tools Function
Everything 34 File search, content search, duplicate detection
Git 20 Version control, diff, branch, commit, stash
Windows 18 PowerShell, process management, services, clipboard
SigCon6 26 Network diagnostics, adapters, TCP, firewall, SMB
Multiplexor 10 Persistent terminals, async commands, sessions
Screen 7 Window capture, pixel detection, screenshots

Data Flow

Request Processing Flow
User Request
     │
     ▼
┌─────────────┐
│ DC receives │
└──────┬──────┘
       │
       ▼
┌─────────────────────┐
│ Check semantic_links│──── BLOCK match? ────► REFUSE
└──────────┬──────────┘
           │
           │ GATE match?
           ▼
┌─────────────────────┐
│ Load specific anchor│
│ (e.g., frontal#build)
└──────────┬──────────┘
           │
           │ Conditions met?
           ▼
┌─────────────────────┐
│   Query PhiSHRI     │
│   for relevant doors│
└──────────┬──────────┘
           │
           │ Need KALIC?
           ▼
┌─────────────────────┐      ┌─────────────────┐
│  Send via P15 Bridge│─────►│  KALIC executes │
└──────────┬──────────┘      └────────┬────────┘
           │                          │
           │◄─────────────────────────┘
           │         Response
           ▼
┌─────────────────────┐
│   Execute locally   │
│   via MCP tools     │
└──────────┬──────────┘
           │
           ▼
┌─────────────────────┐
│  Update temporal.md │
│  (if learning)      │
└──────────┬──────────┘
           │
           ▼
┌─────────────────────┐
│  Create PhiSHRI door│
│  (if significant)   │
└──────────┬──────────┘
           │
           ▼
     Response to User

Communication Protocols

DC ↔ KALIC (P15 Bridge)

Protocol: WM_COPYDATA via SendMessageTimeoutW
Timeout: 1000ms with SMTO_ABORTIFHUNG
Fallback: File-based message queue
Format: JSON payload with action, context, callback

Example:
{
  "action": "security_scan",
  "target": "/var/log/auth.log",
  "callback": "P15_RESPONSE_HWND"
}
        

Agent ↔ MCP Server

Protocol: JSON-RPC over stdio
Format: Standard MCP 1.0 specification
Startup: Sub-second (Rust binaries)
        

Knowledge Access

PhiSHRI: JSON files with semantic indexing
         HASH_TABLE.json → door code lookup
         SEMANTIC_MAP.json → keyword search

Brain Regions: Markdown with anchor sections
              Direct file read, ~50 tokens per lookup
        

Portability Model

The entire system is designed for portability. Mount the VHDX, run the tools. No installation, no configuration, no dependencies.

New Machine Setup:
1. Mount VHDX (or copy folder structure)
2. Run: C:\Tools\carbyne.exe --init
3. Open Claude Desktop with existing config
4. Full capability restored

Time: < 60 seconds
Prerequisites: None
Architecture Multi-Agent MCP Portable